The detailed information of tRNA gene sequence


Sequence ID>W1610760061
Genome IDLNJE01000029
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Methanofastidiosum methylthiophilus group archaeon ADurb1213_Bin02801 [LNJE]
Start position on genome 1809
End posion on genome 1895
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gggtacacca
tRNA gene sequence 
GGAGAGATGCCTGAGCGGTCGAAAGGACACGCTTGGAGAGCGTGCGTATGAGAAATCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGttg
Downstream region at tRNA end position 
acaacacttt
Secondary structure (Cloverleaf model)
>W1610760061	Ser	GGA
                   a      Gttg acaacacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTATGAGAAATCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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