The detailed information of tRNA gene sequence


Sequence ID>W1610771107
Genome IDLNRW01000008
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingopyxis sp. H080 [LNRW]
Start position on genome 24258
End posion on genome 24183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcaaaagg
tRNA gene sequence 
GGGCCTGTAGCTCAACGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGAGT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tttcctccac
Secondary structure (Cloverleaf model)
>W1610771107	Met	CAT
                   g      ACCA tttcctccac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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