The detailed information of tRNA gene sequence


Sequence ID>W1610781281
Genome IDLOBW01000032
Search identical group
Phylum/ClassThermoproteota
SpeciesThermocladium sp. ECH_B [LOBW]
Start position on genome 7620
End posion on genome 7716
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaatccagag
tRNA gene sequence 
GCGGAGGTAGCTCAGCCTGGTGGAGCGATCGGCTCATAACCGATGCGCGTAATGCGCGCG
GGAAAAGCCCCGGGTTCAAATCCCGGCCTCCGCATCA
Downstream region at tRNA end position 
ctatccatat
Secondary structure (Cloverleaf model)
>W1610781281	Met	CAT
                   g      ATCA ctatccatat
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     GCGCGTAATGCGCGCGGGAAAAGCC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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