The detailed information of tRNA gene sequence


Sequence ID>W1610781290
Genome IDLOBY01000015
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum sp. OCT_11 [LOBY]
Start position on genome 3518
End posion on genome 3605
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cggagactcg
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGCCCAAGGCGCGGGACTGGAGATCCCGTCCCCGTCAAGGGGGC
GTGGGTTCAAATCCCACCCCCGGCGCCT
Downstream region at tRNA end position 
tctccctctt
Secondary structure (Cloverleaf model)
>W1610781290	Ser	GGA
                   g      GCCT tctccctctt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TCCCCGTCAAGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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