The detailed information of tRNA gene sequence


Sequence ID>W1610781292
Genome IDLOBY01000102
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum sp. OCT_11 [LOBY]
Start position on genome 4490
End posion on genome 4400
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aatagacaca
tRNA gene sequence 
GCGGCGGTAGTCTAGCCTGGTTTAGGATGGCGGCCTTCCACGCCACCACGAAGAAAGCCG
TTGATCCCGGGTTCGAATCCCGGCCGCCGCAttg
Downstream region at tRNA end position 
actcccccgc
Secondary structure (Cloverleaf model)
>W1610781292	Gly	TCC
                   a      Attg actcccccgc
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T A        G     CACGAAGAAAGCCGTTGATC
                    G - C
                    C   A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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