The detailed information of tRNA gene sequence


Sequence ID>W1610781310
Genome IDLOCB01000115
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. MG_3 [LOCB]
Start position on genome 11621
End posion on genome 11698
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgttaactag
tRNA gene sequence 
GCCCCGGTAGCTCAGCCCGGTTAGAGCGGCGGGCTGCAGACCCGTAGGTCCCGGGTTCAA
ATCCCGGCCGGGGCTCCA
Downstream region at tRNA end position 
aaaatgacac
Secondary structure (Cloverleaf model)
>W1610781310	Cys	GCA
                   g      TCCA aaaatgacac
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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