The detailed information of tRNA gene sequence


Sequence ID>W1610781313
Genome IDLOCC01000012
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. CIS_19 [LOCC]
Start position on genome 6162
End posion on genome 6074
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agccggttaa
tRNA gene sequence 
GCCGGGGTGGCCGAGCCTGGTCCAAGGCGCGGGCCTTGAGAGCCCGTCCCCGCAAGGGGG
CCCGGGTTCAAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
tgtttatggt
Secondary structure (Cloverleaf model)
>W1610781313	Ser	TGA
                   a      GCCA tgtttatggt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         G C C G       C C G G G     C
  G           | | |                 T T
  G         A G G C
    T C C A        G     TCCCCGCAAGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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