The detailed information of tRNA gene sequence


Sequence ID>W1610781314
Genome IDLOCC01000016
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. CIS_19 [LOCC]
Start position on genome 3584
End posion on genome 3497
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gaatagttaa
tRNA gene sequence 
GCGGGGGTGCCCGAGCCTGGTCAAAGGGGGCGGACTTAAGATCCGTTGGCGTAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCACCA
Downstream region at tRNA end position 
tttgcaaatg
Secondary structure (Cloverleaf model)
>W1610781314	Leu	TAA
                   a      ACCA tttgcaaatg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  T         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGTAGGCCTGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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