The detailed information of tRNA gene sequence


Sequence ID>W1610781317
Genome IDLOCC01000055
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. CIS_19 [LOCC]
Start position on genome 10877
End posion on genome 10953
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caagaaaaac
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTAGAGCGGCGGGCTCTTAACCCGTAGGACGTGGGTTCAAA
TCCCACCGGGCCCGCCA
Downstream region at tRNA end position 
gttatgcgtt
Secondary structure (Cloverleaf model)
>W1610781317	Lys	CTT
                   c      GCCA gttatgcgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G T G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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