The detailed information of tRNA gene sequence


Sequence ID>W1610781329
Genome IDLOCC01000117
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. CIS_19 [LOCC]
Start position on genome 3339
End posion on genome 3251
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaagggtgta
tRNA gene sequence 
GCCGGGGTGGCCGAGCTTGGTCTAAGGCGCGGGACTGGAGATCCCGTCCCCGCAAGGGGG
CCCGGGTTCAAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
gcaatgaaac
Secondary structure (Cloverleaf model)
>W1610781329	Ser	GGA
                   a      GCCA gcaatgaaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     A
  T         G C C G       C C G G G     C
  G           | | |                 T T
  G         A G G C
    T C T A        G     TCCCCGCAAGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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