The detailed information of tRNA gene sequence


Sequence ID>W1610781330
Genome IDLOCC01000123
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. CIS_19 [LOCC]
Start position on genome 12145
End posion on genome 12221
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cataggggtg
tRNA gene sequence 
GGGCCCGTAGCTCAGCATGGTAGAGCGTCCGGCTCATAACCGGAAGGTCCCGGGTTCGAA
TCCCGGCGGGCCCACTA
Downstream region at tRNA end position 
gtgaacgtaa
Secondary structure (Cloverleaf model)
>W1610781330	Met	CAT
                   g      ACTA gtgaacgtaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    A       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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