The detailed information of tRNA gene sequence


Sequence ID>W1610781332
Genome IDLOCD01000007
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. JCHS_4 [LOCD]
Start position on genome 4374
End posion on genome 4298
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gcgcattgag
tRNA gene sequence 
GCCGCCGTAGCTCAGCCTGGTGGAGCGGCGGGCTGTTAACCCGTAGGTCCCGGGTTCAAG
TCCCGGCGGCGGCGCCA
Downstream region at tRNA end position 
gagaatgaca
Secondary structure (Cloverleaf model)
>W1610781332	Asn	GTT
                   g      GCCA gagaatgaca
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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