The detailed information of tRNA gene sequence


Sequence ID>W1610781333
Genome IDLOCD01000016
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. JCHS_4 [LOCD]
Start position on genome 2393
End posion on genome 2471
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttagggtaat
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGATTAGAGCGGCGGCCTCCGGAGCCGTAGGACCCGGGTTCA
AATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
gttaccagcc
Secondary structure (Cloverleaf model)
>W1610781333	Arg	CCG
                   t      GCCA gttaccagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    A T T A        G     AGGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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