The detailed information of tRNA gene sequence


Sequence ID>W1610781342
Genome IDLOCD01000109
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga sp. JCHS_4 [LOCD]
Start position on genome 11658
End posion on genome 11734
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgagagcctt
tRNA gene sequence 
AGCGGCGTAGGGAAGCCTGGTATCCTGCGGGGCTCATAACCCCGAGGTCGGTGGTTCGAA
TCCACCCGCCGCTACCA
Downstream region at tRNA end position 
taacctnnnn
Secondary structure (Cloverleaf model)
>W1610781342	Met	CAT
                   t      ACCA taacctnnnn
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C A C C     A
      C G A        A      | | | | |     G
    C       A G G G       G G T G G     C
    T       | | | +                 T T
    G       T C C T
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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