The detailed information of tRNA gene sequence


Sequence ID>W1610781356
Genome IDLOCE01000061
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCHS_4 [LOCE]
Start position on genome 3906
End posion on genome 3979
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tacacaaccc
tRNA gene sequence 
GCCGCCGTAGCTCAGCCAGGTAGAGCGTCGCCTTGGTAAGGCGAAAGTCCCGGGTTCAAA
TCCCGGCGGCGGCTttc
Downstream region at tRNA end position 
attctcattt
Secondary structure (Cloverleaf model)
>W1610781356	Thr	GGT
                   c      Tttc attctcattt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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