The detailed information of tRNA gene sequence


Sequence ID>W1610781357
Genome IDLOCE01000084
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCHS_4 [LOCE]
Start position on genome 2304
End posion on genome 2228
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caagaaaaac
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTAGAGCGGCGGGCTCTTAACCCGTAGGTCGTGGGTTCAAA
TCCCACCGGGCCCGCCA
Downstream region at tRNA end position 
gggtttgctt
Secondary structure (Cloverleaf model)
>W1610781357	Lys	CTT
                   c      GCCA gggtttgctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G T G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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