The detailed information of tRNA gene sequence


Sequence ID>W1610781361
Genome IDLOCE01000101
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. JCHS_4 [LOCE]
Start position on genome 53777
End posion on genome 53854
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
caaacaaccc
tRNA gene sequence 
GCCGGGGTAGTGTAGTCTGGTTAGCATGCGGGCCTGTGGAGCCCGTGAACCCGGGTTCAA
ATCCCGGCCCCGGCCCCA
Downstream region at tRNA end position 
tgaatactat
Secondary structure (Cloverleaf model)
>W1610781361	His	GTG
                   c      CCCA tgaatactat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  T         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    T T A          G     TGAAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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