The detailed information of tRNA gene sequence


Sequence ID>W1610788728
Genome IDLOHE01000075
Search identical group
Phylum/ClassBacillota
SpeciesAbyssisolibacter fermentans MCWD3 [LOHE]
Start position on genome 11236
End posion on genome 11329
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataatttat
tRNA gene sequence 
GGAGAGATGGCTGAGTTTGGCTGAAGGCGCTCGCCTGGAAAGCGGGTAGGCGGCGAATAC
CGTCTCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gtaaagtttg
Secondary structure (Cloverleaf model)
>W1610788728	Ser	GGA
                   t      GCCA gtaaagtttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     A
  T         G T C G       G A G G G     C
  G           + | |                 T T
  G         A G G C
    C T G A        G     TAGGCGGCGAATACCGTCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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