The detailed information of tRNA gene sequence


Sequence ID>W1610789322
Genome IDLOHR01000148
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesYersinia pestis [LOHR]
Start position on genome 4880
End posion on genome 4969
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaacgaaac
tRNA gene sequence 
GGTGAGGTGTCTGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGCGTAAGCGTA
TCGAGGGTTCGAACCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
aattcaaaaa
Secondary structure (Cloverleaf model)
>W1610789322	Ser	GGA
                   c      GCCA aattcaaaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TATACGCGTAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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