The detailed information of tRNA gene sequence


Sequence ID>W1610799776
Genome IDLOPU01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloprofundus marisrubri SB9 [LOPU]
Start position on genome 504
End posion on genome 578
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgctgggagT
tRNA gene sequence 
GGGCCCATAGCTCAGTGGTAGAGTGCCTCCTTTGCAAGGAGGATGCCCAGGGTTCGAATC
CCTGTGGGTCCATCt
Downstream region at tRNA end position 
ctcggtgtga
Secondary structure (Cloverleaf model)
>W1610799776	Ala	TGC
                   T      ATCt ctcggtgtga
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G T C C C     A
        G A        A      | | | | |     G
      T     C T C G       C A G G G     C
      G     | | | +                 T T
      G     G A G T
        T A        G     ATGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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