The detailed information of tRNA gene sequence


Sequence ID>W1610799790
Genome IDLOPU01000017
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloprofundus marisrubri SB9 [LOPU]
Start position on genome 75041
End posion on genome 75126
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tggaacgtaa
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGCCAAGGCGGTAGATTCGAAATCTACTGTCCATTCGGACTC
GGGAGTTCAAATCTCTCCCTCGGCGCtt
Downstream region at tRNA end position 
ttcgttctgt
Secondary structure (Cloverleaf model)
>W1610799790	Ser	CGA
                   a      GCtt ttcgttctgt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    C C G A        A      | + | | |     A
  T         T C C G       G G G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCATTCGGACTC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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