The detailed information of tRNA gene sequence


Sequence ID>W1610799815
Genome IDLOPU01000030
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloprofundus marisrubri SB9 [LOPU]
Start position on genome 135903
End posion on genome 135829
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctgtcggcgc
tRNA gene sequence 
GCCAGGAGAGCATGGGCGGTGCATGCACTCGACTTGTAATCGAGACTTCGTGGGTTCAAA
TCCCACTCCTGGCTCtt
Downstream region at tRNA end position 
ctcgtccgag
Secondary structure (Cloverleaf model)
>W1610799815	Thr	TGT
                   c      TCtt ctcgtccgag
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    G     C A C C C     A
      G G G        A      | | | | |     A
    C       T A C G       G T G G G     C
    G       | | | |                 T T
    G       A T G C
      T G C        A     ACTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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