The detailed information of tRNA gene sequence


Sequence ID>W1610799819
Genome IDLOPU01000034
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloprofundus marisrubri SB9 [LOPU]
Start position on genome 7787
End posion on genome 7860
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtactgatgc
tRNA gene sequence 
GGGACCATGGGTTAGCCTGGTATACTTCGGGCCTTGGGTGCCCGTGACCCCGGTTCAAAT
CCGGGTGGTCTCACtc
Downstream region at tRNA end position 
caccgtttta
Secondary structure (Cloverleaf model)
>W1610799819	Pro	TGG
                   c      ACtc caccgtttta
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
      C G A        G      | | | | |     A
    C       T T G G       C C C G G     C
    T         | | +                 T T
    G       T A C T
      G T A        T     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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