The detailed information of tRNA gene sequence


Sequence ID>W1610799830
Genome IDLOPV01000048
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax profundi SB29 [LOPV]
Start position on genome 21750
End posion on genome 21822
Amino Acid Pseudo
Anticodon CGG
Upstream region at tRNA start position 
gtgagaatgc
tRNA gene sequence 
GGGCCGGTGGGGTAGCTTGGTATCCTTCGGCCTTCGGGTGGCCGTAACCTCAGTTCGAAT
CTGAGCCGGCCCAttt
Downstream region at tRNA end position 
ctaccccttt
Secondary structure (Cloverleaf model)
>W1610799830	Pseudo	CGG
                   c      Attt ctaccccttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G A G T C     A
      C G A        G      | | | | |     G
    T       T G G G       C T C A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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