The detailed information of tRNA gene sequence


Sequence ID>W1610799858
Genome IDLOPV01000419
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax profundi SB29 [LOPV]
Start position on genome 101
End posion on genome 175
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtcgaccga
tRNA gene sequence 
GGGCCCCTAGCTCAGTCTGGTCAGAGCGCTCGGCTCATAACCGGGTGGTCATGGGTTCGA
ACCCCATGGGGCCCAtga
Downstream region at tRNA end position 
tttcctgcga
Secondary structure (Cloverleaf model)
>W1610799858	Met	CAT
                   a      Atga tttcctgcga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G          C A
                    T     T A C C C     A
    C T G A        A      | | | | |     G
  T         C T C G       A T G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     TGGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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