The detailed information of tRNA gene sequence


Sequence ID>W1610800539
Genome IDLOQH01000079
Search identical group
Phylum/ClassFusobacteriota
SpeciesCaviibacter abscessus [LOQH]
Start position on genome 52058
End posion on genome 51983
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attattaaat
tRNA gene sequence 
AGGTCAGTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAAAGTTACGGGTTCGATT
CCTGTCTGGCCTGCCA
Downstream region at tRNA end position 
ttttatttta
Secondary structure (Cloverleaf model)
>W1610800539	Trp	CCA
                   t      GCCA ttttatttta
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | + | |     G
    T       C T T G       A C G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          G     AAGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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