The detailed information of tRNA gene sequence


Sequence ID>W1610840104
Genome IDLPRE01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius GG12-C01-03 [LPRE]
Start position on genome 247762
End posion on genome 247675
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtacttatt
tRNA gene sequence 
GCCGGGGTCGCCTAGCTCGGTAGGGCGGAGGCCTGCTAAGCCTCTGGGGTCCCACCCCGC
GCGGGTTCAAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
tgaatattat
Secondary structure (Cloverleaf model)
>W1610840104	Ser	GCT
                   t      GCCA tgaatattat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        C      | | | | |     A
    T       T C C G       G C G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGGGGTCCCACCCCGC
                    G - C
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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