The detailed information of tRNA gene sequence


Sequence ID>W1610841003
Genome IDLPSO01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius NG05B_CO5_09 [LPSO]
Start position on genome 878262
End posion on genome 878186
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tctaattatT
tRNA gene sequence 
GGGCCCGTAGTCTAGCCTGGTTAGGACGCTGCCCTCACACGGCAGAAGTCCCGAGTTCAA
ATCTCGGCGGGCCCATgt
Downstream region at tRNA end position 
gggggacacc
Secondary structure (Cloverleaf model)
>W1610841003	Val	CAC
                   T      ATgt gggggacacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G A G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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