The detailed information of tRNA gene sequence


Sequence ID>W1610841054
Genome IDLPSQ01000003
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius NG05B_CO5_11 [LPSQ]
Start position on genome 40368
End posion on genome 40283
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atataatgcT
tRNA gene sequence 
GCCGGGGTGCCCGAGCGGTCCAAGGGGCTGGCCTTGAGAGCCAGTAGGGTTATCCCTGCG
TGGGTTCAAATCCCACCCCCGGCGTtg
Downstream region at tRNA end position 
tggggttagg
Secondary structure (Cloverleaf model)
>W1610841054	Ser	TGA
                   T      GTtg tggggttagg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    T       A G G G
      C C A        G     TAGGGTTATCCCTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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