The detailed information of tRNA gene sequence


Sequence ID>W1610845952
Genome IDLPXO01000003
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPseudoponticoccus marisrubri SJ5A-1 [LPXO]
Start position on genome 345966
End posion on genome 346042
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
accgcgctgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCGTCTGTTTTGGGTACAGAAGGTCGTGAGTTCGAA
TCTCGCCGCCCCGACCA
Downstream region at tRNA end position 
cctctccatt
Secondary structure (Cloverleaf model)
>W1610845952	Pro	TGG
                   t      ACCA cctctccatt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | + | | |     G
    C       C G C G       G T G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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