The detailed information of tRNA gene sequence


Sequence ID>W1610855505
Genome IDLQMW01000007
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. Nsub [LQMW]
Start position on genome 2269
End posion on genome 2184
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacatttttT
tRNA gene sequence 
GCCGAGGTCGCTTAGTTCGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCACGCG
GGGGTTCAAATCCCTCTCTCGGCGTtt
Downstream region at tRNA end position 
ttaattttct
Secondary structure (Cloverleaf model)
>W1610855505	Ser	TGA
                   T      GTtt ttaattttct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        C      | + | | |     A
    T       T T C G       G G G G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     TGTGCGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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