The detailed information of tRNA gene sequence


Sequence ID>W1610858983
Genome IDLQRJ01000020
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans [LQRJ]
Start position on genome 19317
End posion on genome 19409
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcccgctacc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGCTAAACACT
CCATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cccttactgg
Secondary structure (Cloverleaf model)
>W1610858983	Ser	GCT
                   c      GCCA cccttactgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGCTAAACACTCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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