The detailed information of tRNA gene sequence


Sequence ID>W1610875516
Genome IDLRDG01000039
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [LRDG]
Start position on genome 4162
End posion on genome 4235
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggttttcgtc
tRNA gene sequence 
GGGCCCATAGCTCAGCGGTTAGAGCAGTGGACTCATAATCCATTGGTCGTAGGTTCAAAT
CCTACTGGGCCCACtc
Downstream region at tRNA end position 
gatggcggac
Secondary structure (Cloverleaf model)
>W1610875516	Met	CAT
                   c      ACtc gatggcggac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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