The detailed information of tRNA gene sequence


Sequence ID>W1610911770
Genome IDLSHQ01000061
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. CCH5-A5 [LSHQ]
Start position on genome 101223
End posion on genome 101134
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcctcgctgc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGATTGGGACGGTCTCGAAAACCGTTGTGCCTTTACGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cttctctcgt
Secondary structure (Cloverleaf model)
>W1610911770	Ser	CGA
                   c      GCCA cttctctcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TGTGCCTTTACGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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