The detailed information of tRNA gene sequence


Sequence ID>W1610919999
Genome IDLSSD01000032
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SG8-52-1 [LSSD]
Start position on genome 5555
End posion on genome 5629
Amino Acid Pseudo
Anticodon CGG
Upstream region at tRNA start position 
atggtaaagT
tRNA gene sequence 
GGGCCCGTGGGGTAGCTTGGTATCCTTGTAGCTTCGGGAGTTATAGACTTGAGTTCAAAT
CTCAGCGGGCCCATag
Downstream region at tRNA end position 
cttaaatata
Secondary structure (Cloverleaf model)
>W1610919999	Pseudo	CGG
                   T      ATag cttaaatata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      + | | | |     A
    T       T G G G       T T G A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     AGAC
                    G + T
                    T - A
                    A - T
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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