The detailed information of tRNA gene sequence


Sequence ID>W1610920004
Genome IDLSSD01000037
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SG8-52-1 [LSSD]
Start position on genome 264
End posion on genome 336
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgctcaataA
tRNA gene sequence 
GGGCGGGTAACAAAGTGGCTATGTGGCGGACTGCAGATCCGCATACGAGGGTTCAAATCC
CTCTCCGCCCTTtt
Downstream region at tRNA end position 
tctaataata
Secondary structure (Cloverleaf model)
>W1610920004	Cys	GCA
                   A      TTtt tctaataata
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
        G A        A      | | | | |     A
      T     A A C A       G A G G G     C
      G       | | |                 T T
      G     A T G T
        C T        G     ATAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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