The detailed information of tRNA gene sequence


Sequence ID>W1610920012
Genome IDLSSD01000066
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SG8-52-1 [LSSD]
Start position on genome 6603
End posion on genome 6690
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgtttttT
tRNA gene sequence 
GCCGAGGTGGCCCAGCCCGGAACGGCGCGAGCCTGGAGAGCTCGTGGGGACTTGTCCCCT
CGGGAGTTCAAATCTCCCCCTCGGCGTaa
Downstream region at tRNA end position 
atttataaga
Secondary structure (Cloverleaf model)
>W1610920012	Ser	GGA
                   T      GTaa atttataaga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        G      | | | | |     A
    C       C C C G       G G G A G     C
    C         | | |                 T T
    G       C G G C
      G A A        G     TGGGGACTTGTCCCCTC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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