The detailed information of tRNA gene sequence


Sequence ID>W1610920023
Genome IDLSSE01000019
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SG8-52-2 [LSSE]
Start position on genome 3990
End posion on genome 3915
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aagaaccata
tRNA gene sequence 
GGGCCCGTAGGGTAGCTTGGTCGATCCTTTTAGCTTTGGGAGCTAGAGACTCCAGTTCAA
ATCTGGGCGGGCCCACtt
Downstream region at tRNA end position 
ttattttatt
Secondary structure (Cloverleaf model)
>W1610920023	Pro	TGG
                   a      ACtt ttattttatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G T C     A
    T C G A        A      + | | | |     A
  T         T G G G       T C C A G     C
  G           | | +                 T T
  G         T C C T
    T C G A        T     AGAC
                    T + G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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