The detailed information of tRNA gene sequence


Sequence ID>W1610920047
Genome IDLSSF01000038
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SG8-52-4 [LSSF]
Start position on genome 9603
End posion on genome 9529
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagattttaa
tRNA gene sequence 
GGGCTCGTAGCTTAGACTGGCGGAGCGTCTGGCTCATAACCAGATGGTCGCAGGTTCAAA
TCCTGCCGGGCCCACtt
Downstream region at tRNA end position 
gttcccaacc
Secondary structure (Cloverleaf model)
>W1610920047	Met	CAT
                   a      ACtt gttcccaacc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A G A        A      | | | | |     A
    C       T T C G       G C A G G     C
    T       + | | |                 T T
    G       G A G C
      G C G        G     TGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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