The detailed information of tRNA gene sequence


Sequence ID>W1610920053
Genome IDLSSF01000059
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SG8-52-4 [LSSF]
Start position on genome 6962
End posion on genome 6890
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
attgaaaatc
tRNA gene sequence 
GGGCCCGTAGGGTAGCTTGGTATCCTTGTAGCTTCGGGAGTTATAGACTTGAGTTCAAAT
CTCAGCGGGCCCAtat
Downstream region at tRNA end position 
caataaacaa
Secondary structure (Cloverleaf model)
>W1610920053	Pro	CGG
                   c      Atat caataaacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        A      + | | | |     A
    T       T G G G       T T G A G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     AGAC
                    G + T
                    T - A
                    A - T
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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