The detailed information of tRNA gene sequence


Sequence ID>W1610920087
Genome IDLSSH01000068
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Proteinoplasmatales archaeon SG8-5 SG8-5 [LSSH]
Start position on genome 4844
End posion on genome 4771
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cctccccaac
tRNA gene sequence 
GGGCTCATGGTCTAGTTGGTTAGGACGTCACCTTGACACGGTGAAGATCTCCAGTTCGAA
TCTGGATGGGCCCAttt
Downstream region at tRNA end position 
tttcttatat
Secondary structure (Cloverleaf model)
>W1610920087	Val	GAC
                   c      Attt tttcttatat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     A G G T C     A
      T G A        G      | | | | |     G
    T       T C T G       T C C A G     C
    G       + | | |                 T T
    G       G G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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