The detailed information of tRNA gene sequence


Sequence ID>W1610920092
Genome IDLSSH01000108
Search identical group
Phylum/ClassEuryarchaeota
SpeciesCandidatus Proteinoplasmatales archaeon SG8-5 SG8-5 [LSSH]
Start position on genome 3282
End posion on genome 3197
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtatcgcaat
tRNA gene sequence 
GCCGAGATAGCTCAGCCTGGTAGGGCGCAAGCCTGGAAAGCTTGTGGCGGTTTACGCCTC
GGGAGTTCAAATCTCCCTCTCGGCGCtt
Downstream region at tRNA end position 
tgttttgttt
Secondary structure (Cloverleaf model)
>W1610920092	Ser	GGA
                   t      GCtt tgttttgttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    C       C T C G       G G G A G     C
    T       | + | |                 T T
    G       G G G C
      G T A        G     TGGCGGTTTACGCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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