The detailed information of tRNA gene sequence


Sequence ID>W1610920096
Genome IDLSSI01000008
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 7354
End posion on genome 7280
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acaaaaaccT
tRNA gene sequence 
GCTCCTGTGGTGTAGCGGCCAATCATGAGGCCCTTTCGAGGCTTCGACTTGGGTTCGAAT
CCCGACAGGAGCATtg
Downstream region at tRNA end position 
tttcattttt
Secondary structure (Cloverleaf model)
>W1610920096	Glu	TTC
                   T      ATtg tttcattttt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A G C C C     A
      C G A        G      | + | | |     G
    G       T G T G       T T G G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     CGAC
                    A - T
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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