The detailed information of tRNA gene sequence


Sequence ID>W1610920099
Genome IDLSSI01000026
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 8794
End posion on genome 8867
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caagaaacat
tRNA gene sequence 
GCCCCGGTAGTGTAGTGGCCTATCATGAAGCCCTGTCGAGGCTTCGACTTGGGTTCGAAT
CCCAGCCGGGGCGCtt
Downstream region at tRNA end position 
ctttcttttt
Secondary structure (Cloverleaf model)
>W1610920099	Asp	GTC
                   t      GCtt ctttcttttt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        A      + | | | |     G
    G       T G T G       T T G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        G     CGAC
                    A - T
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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