The detailed information of tRNA gene sequence


Sequence ID>W1610920101
Genome IDLSSI01000030
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 569
End posion on genome 640
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caaaacttac
tRNA gene sequence 
GGGCGGGTAACAAAGTGGCGATGTGGCGGACTGCAGATCCGCCTACGAGGGTTCAAATCC
CTCCCCGCCCTCtg
Downstream region at tRNA end position 
aataaatctg
Secondary structure (Cloverleaf model)
>W1610920101	Cys	GCA
                   c      TCtg aataaatctg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
        G A        A      | | | | |     A
      T     A A C A       G A G G G     C
      G       | | |                 T T
      G     A T G T
        C G        G     CTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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