The detailed information of tRNA gene sequence


Sequence ID>W1610920103
Genome IDLSSI01000035
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 1748
End posion on genome 1676
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
accctggaat
tRNA gene sequence 
GCCGCCGTAGCTTAGCTGGTGGAGCGGCTGATTCGTAATCAGCAGGTCAGGGGTTCAAAT
CCCTTCGGCGGCTtgg
Downstream region at tRNA end position 
cattcttatt
Secondary structure (Cloverleaf model)
>W1610920103	Thr	CGT
                   t      Ttgg cattcttatt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     A
    T       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      T G          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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