The detailed information of tRNA gene sequence


Sequence ID>W1610920105
Genome IDLSSI01000038
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 2121
End posion on genome 2213
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtcatcgagT
tRNA gene sequence 
GCTGGGGTAGCCAAGCCCGGATCAAGGCGATAGCCTCGAGAGCTATTGGTGCTTTGTTCA
CCGCAAGGGTTCAAATCCCTTCCCCAGCGTCC
Downstream region at tRNA end position 
gatttaatgg
Secondary structure (Cloverleaf model)
>W1610920105	Ser	CGA
                   T      GTCC gatttaatgg
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        A      | | | | |     A
  C         A C C G       A A G G G     C
  G           | | |                 T T
  G         A G G C
    A T C A        G     TGGTGCTTTGTTCACCGC
                    A - T
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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