The detailed information of tRNA gene sequence


Sequence ID>W1610920110
Genome IDLSSI01000050
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 5
End posion on genome 95
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnttct
tRNA gene sequence 
GCTGAGGTAGCAAAGCTCGGTTTACCGCGCCGGCCTTGAGAGCCGGTTCTCCGTAAGGGG
AGCGGGAGTTCAAATCTCCCCCTCAGCGCTA
Downstream region at tRNA end position 
ctctctttgg
Secondary structure (Cloverleaf model)
>W1610920110	Ser	TGA
                   t      GCTA ctctctttgg
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    T C G A        A      | | | | |     A
  C         A A C G       G G G A G     C
  G             | |                 T T
  G         C C G C
    T T T A        G     TTCTCCGTAAGGGGAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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