The detailed information of tRNA gene sequence


Sequence ID>W1610920111
Genome IDLSSI01000050
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 104
End posion on genome 179
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tactctcttt
tRNA gene sequence 
GGGCGTGTGGCCTAGCCTGGATAAGGCACCGGCCTTCTAAGTCGGTAATCGCGGGTTCGA
ATCCCGCCACGTCCGCtc
Downstream region at tRNA end position 
cattaatatt
Secondary structure (Cloverleaf model)
>W1610920111	Arg	TCT
                   t      GCtc cattaatatt
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  T         T C C G       G C G G G     C
  G         | | | |                 T T
  G         A G G C
    A T A          A     TAATC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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