The detailed information of tRNA gene sequence


Sequence ID>W1610920114
Genome IDLSSI01000058
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SM1-50 [LSSI]
Start position on genome 6853
End posion on genome 6778
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tctttttttt
tRNA gene sequence 
GCCGCGGTAACTCAGATGGGAGAGTGCACGGCTGAAGACCGTGATGTCGAGGGTTCGATC
CCCTCCTGCGGCACTA
Downstream region at tRNA end position 
gctgtaaggg
Secondary structure (Cloverleaf model)
>W1610920114	Phe	GAA
                   t      ACTA gctgtaaggg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G + T
                     G - C          C T
                    T     C T C C C     A
      A G A        A      | | | | |     G
    T       C T C A       G A G G G     C
    G       | | | |                 T T
    G       G A G T
      G A          G     ATGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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